Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVTGFTITDEKVHLYHSIEKEKTVRHIGDLCSSHSVKKIQVGICLLLVELCERFTFFEVVCNMIPFCTIKLGYHNCQAAILNLCFIGTSILTPVFVRWLTDVYLGRNKLVYICLFLHFLGTALLSVVAFPLEDFYLGTYHAVNNIPKTEQHRLF-YVALLTICLGIGGVRA-IVCPLGAFGLQEYGSQKTMSFFNWFYWLMNLNATIVFLGISYIQHSQAWALVLLIPFMSMLMAVITLHMIYYNLIYQSEKRCSLLTGVGVLVSALKTCHPQYCHLGRDVTSQLDHAKEKNGGCYSELHVEDTTFFLTLLPLFIFQLLYRMCIMQIPSGYYLQTMNSNLNLDGFLLPIAVMNAISSLPLLILAPFLEYFSTCLFPSKRVGSFLSTCIIAGNLFAALSVMIAGFFEIHRKHFPAVEQPLSGKVLTVSSMPCFYLILQYVLLGVAETLVNPALSVISYRFVPSNVRGTSMNFLTLFNGFGCFTGALLVKLVYLISDGNWFPNTLNKGNLESFFFFLASLTLLNVLGFCSVSQRYCNLNHFNAQNIRGSNLEETLLLHEKSLKFYGSIQEFSSSIDLWETAL |
| 4Q65 Chain:A ((17-183)) | ------------------------------------------------LQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG---------------------ASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGE--LYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVRATNFLLPNWGWLLVLLVATPALITILFWKEWSVYALIVATIIGLGVLAKIYENQKQRELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNTVPTAMFQSINAFAVMLCGVFLAWVVNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGLPLMVLGLAVMGFAELFIDPVAMSQITRIEVTGVLTGIYMLLSGAIANYLAGVIADQTSSINAYIEVFDQITWGALACVGVVLMIWLYQA------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179202 for 1295 contacts (-138.4/contact) +
2D Compatibility (PS) -16262 + (NN) -1604 + (LL) 11552
1D Compatibility (HY) -13600 + (ID) 2050
Total energy: -201166.0 ( -155.34 by residue)
QMean score : 0.225
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