Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEQNHSPGKELQHRTRAEAPGKKSWHSQAYALGAVSNFMSTFLTFPIYKVVFRQQIHAMAVSEAVRQLWHEGPQYFYRGIYPPLLSKTLQGTLLFGTYDSLLCFLSPVGPHTLGHRWAAGLMSGVVEAVA---LSPFERVQNVLQDGR---KQARFPSTFS-ILKEFNSYGLWGRLSLGYYRGFWPVLARNSLGSALYFSFKDPIQDGLA---EQGLPHWVPA-LVSGSVNGTITCLVLYPLIVLVANMQSHIGWQNMPSLWASAQDVWNTRGRKLLLIYRGGSLVILRSSVTWGLTTAIHDFLQRKSHSRKELKTD |
| 4C9H Chain:B ((28-148)) | -------------------------------------------------------------------------------------------------------------------------LMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGV-ISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADSKGARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLKLASFLLGWVVTTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24967 for 601 contacts (-41.5/contact) +
2D Compatibility (PS) -10740 + (NN) 3736 + (LL) 7660
1D Compatibility (HY) -8800 + (ID) 1900
Total energy: -35011.0 ( -58.25 by residue)
QMean score : 0.064
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