Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK---
2JV8 Chain:A ((1-73))
MTHHTEVFEG--------------------GTIDIE------------DDTSLTINGKEISYVHDAVKNK-------WSSRYLPYTQYDSLLDLARAIIRDTVEFSGVKEGS
General information:
TITO was launched using:
RESULT:
Template:
2JV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2374 for 427 contacts (5.6/contact) +
2D Compatibility (PS) -7410 + (NN) -918 + (LL) 3092
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -7512.0 ( -17.59 by residue)
QMean score : 0.036
(partial model without unconserved sides chains):
PDB file :
Tito_2JV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JV8-query.scw
PDB file :
Tito_Scwrl_2JV8.pdb
: