Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQE-LFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSGQDLRFLKD--MALTEK-DGRRYLVNMALDPNGLCYFSYVNQDE-R-EATADEM-DQALGKLQEDWEKFLSDPLPADSEVDLYEEKPS-------------GS-YQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDY-------------IGDNLY----TIWE-LVLK-------------SEFTSLSYD---NHIYAMYSNDGGTS-MVLIYSP----IEERFVG-----FSLKY------ |
| 3DSM Chain:A ((1-327)) | -------------ASGLFITNEGNFQYSNATLSYYDPATCEVEN----EVFYRANGFKLG--------DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIIN----PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIPGAFCWKLEHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5734 for 1847 contacts (-3.1/contact) +
2D Compatibility (PS) -26515 + (NN) 7197 + (LL) 2536
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -36416.0 ( -19.72 by residue)
QMean score : 0.015
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