Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------MLTVEVEVKITADDENKAEEIVKRV---------------IDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLI----EERIEEELRKRDPNATITRTVRTE----------VGSSWSLEHHHHHH
2L82 Chain:A ((1-162))
MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDD--KEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2L82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23343 for 629 contacts (37.1/contact) +
2D Compatibility (PS) -12508 + (NN) -9228 + (LL) -120
1D Compatibility (HY) -4000 + (ID) 1500
Total energy: -4013.0 ( -6.38 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_2L82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L82-query.scw
PDB file :
Tito_Scwrl_2L82.pdb
: