Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLLLITLLIGYIYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWSSNVIEYDRFMSQQADFIVDQAFTKAMADEIGKTELMITMLLSPNTGEVMEVNFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAWMQKPQGKLPPLPPPGSLM |
3M30 Chain:C ((195-228)) | --------------------DEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVE------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3M30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1799 for 122 contacts (-14.7/contact) +
2D Compatibility (PS) -3356 + (NN) -250 + (LL) 12920
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 4865.0 ( 39.88 by residue)
QMean score : 0.055
|
|
|