Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
1QBZ Chain:A ((2-121))
----------------------------QSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWG----------------------TPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKL-
General information:
TITO was launched using:
RESULT:
Template:
1QBZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6313 for 490 contacts (12.9/contact) +
2D Compatibility (PS) -11230 + (NN) -4738 + (LL) 2544
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: -16961.0 ( -34.61 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_1QBZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QBZ-query.scw
PDB file :
Tito_Scwrl_1QBZ.pdb
: