Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
| 3JVT Chain:C ((85-137)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYMEAFKTFDREGQGFISGAELRHV------LTALGERLSDEDVDEIIKLTDLQEDLEG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1687 for 262 contacts (-6.4/contact) +
2D Compatibility (PS) -5420 + (NN) -685 + (LL) 16404
1D Compatibility (HY) -3600 + (ID) 800
Total energy: 4212.0 ( 16.08 by residue)
QMean score : 0.035
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