Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MSYTLFEIGPFALDSFGWKETIP----------------------PKKDGDSEKVVRMASP-----------IIVNARFSDPITGVEKLIITNNNGKKDIF---ESDILTTRNLPSLIKYGYSINEKYIRSLSYA-------LQLMRDRLPLSELYEGVGILETPFGYLISL-----DKVLKSI-----QFNQSSPSYPIVDSAYDLTPKG--TFDNWFN-----------MYIDEVKGHLLLELAVIFGIS--------ALVTSFLKHKHEIEFAGILFS----FTGQSS----TGKSTAAALAVSVAGNPTKGNETLFRSWNATRNALEGYLSN---------NYGIPIVFDELSS--TTLRDTTGLLYSIAEGQGRQRSNVHGE--VKTPKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKE----VDWFEAKLKDETNNTGIRMFKRYAVITTSAKILGRVLSTDIDIANIRDY-------FIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGL------------ISLKDDHIEVKII------ANVFKQMLN--NHQFQDVNNVVNALRDKGFILADRG-----RQTTKRSVKDNSGK-----KQSLVFYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANE------------GIGPSGVHEDF-------------------- |
| 4J5T Chain:A ((1-811)) | AEFMEEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTASVVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILERPADLIPSVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIG----------DFMTNNLEAN----------PGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNEVY-------RWVGRTF-THCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILGRFRSHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15326 for 3839 contacts (-4.0/contact) +
2D Compatibility (PS) -58363 + (NN) -1236 + (LL) 2808
1D Compatibility (HY) -22000 + (ID) 5500
Total energy: -99617.0 ( -25.95 by residue)
QMean score : 0.153
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