Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---GEGVSYSDG-HFLTKSGGVINFRKTRV---TSITITILGNYGLRVVNGELQNTPLTFKGADFKSSTLKDELLIPLEGAVQLNTAPS---TALCIFITTDHV-----YRELCMMQF-L-TDVDKTPFLVVLRSESKHETIQYMHIVTVHP-FLSLTA----
2QZQ Chain:A ((19-170))
GSLLPRLPSEPGMTLLTLTIEKIGLKDAGQCIDPYITVSVKDLNGIDLNP--VQDTPV---------ATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEIKPGPIVIELYKKPTDFKRKKLNLLTKKPLYLHLNQTLHK
General information:
TITO was launched using:
RESULT:
Template:
2QZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61538 for 892 contacts (-69.0/contact) +
2D Compatibility (PS) -14202 + (NN) -555 + (LL) 244
1D Compatibility (HY) 6800 + (ID) 400
Total energy: -69651.0 ( -78.08 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_2QZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QZQ-query.scw
PDB file :
Tito_Scwrl_2QZQ.pdb
: