Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISG-NEEKLMKGK-----FIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKR--NEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGNYKNNVKVNIEGGVGEATVYLPK---SIGVKIKAEK-GVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK---------------------------------------------------------------------------------------- |
| 3W5F Chain:A ((3-708)) | EAEFSVSYDDRAIIINGKRKILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEPSPGKYNFEGRYDLVRFIKMVQRAGLYVNLRIGPYVCAEWNFGGFPVWLKYVPGMEFRTNNQPFKVAMQGFVQKIVNMMKSENLFESQGGPIIMAQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLKTGVPWIMCKQEDAPDPVIDTCNGFYCEGFRPNKPYKPKMWTEVWTGWYTKFGGPIPQRPAEDIAFSVARFVQNNGSFFNYYMYHGGTNFGRTSSGLFIATSYDYDAPLDEYGLLNEPKYGHLRDLHKAIKLSEPALVSSYAAVTSLGSNQEAHVYRSKSGACAAFLSNYDSRYSVKVTFQNRPYNLPPWSISILPDCKTAVYNTAQVNSQSS----SIKMTPAGGGLSWQSYNEETPTALTANGLWEQKNVTRDSSDYLWYMTNVNIASNEGFLKNGKDPYLTVMSAG-HVLHVFVNGKLSGTVYGTLDNPKLTYSGNVKLRAG-----INKISLLSVSVGLPNVGVHYDTW-NAGVLGPVTLSG-LNEGSRNLAKQKWSYKVGLKGESLSLHSLSGSSSVEWVRGSLMAQKQPLTWYKATFNAPGGNDPLALDMASMGKGQIWINGEGVGRHWPGYIAQGDCSKCSYAGTFNEKKCQTNCGQPSQRWYHVPRSWLKPSGNLLVVFEEWGGNPTGISLVRRSRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 70316 for 1404 contacts (50.1/contact) +
2D Compatibility (PS) -23879 + (NN) 9478 + (LL) 292
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: 48557.0 ( 34.58 by residue)
QMean score : 0.027
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