Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVKRRTFLQGAAGAIGLAMAQGALSKIVYAQGAAGTLRVAIAKPAGNLDPQSHYAIWAIQDLMFEPLVKYGKGGQIEPCLATDWKIEDGGKTLHLTLREGVKFQDGTKFDAAACKWNLERWMGIDQ-FSWMNCSKHFQSLEVVDDYHITVHFKEPVLALMQELSYTRPTRFLSP---KSVDADGKFKEPVGTGPWV-QISADDTQSVFEHYDGYWGDKPTYERLEAKVIPDARSRVAALRAGEIDLV-GGFWIAPLTPEEGKQLEAAGFNVVVDPGNVTLVMAFNPDRAEPLKDPQVRKAVSIGIDRAAISKVLYHGYAKPAGNMFSAALPYAGKQFDAPVRDAAAASALLEKAGWT---GSPIRSKDGKPLTLEL-VVSPDAVPGSRVIAEVIQSEMKEVGIDLVIRSVDHASKHTDMLEQKYDLGFFLTYGAPYDPFGSLVALCLSTFKNDVEGKLVTDPVNLDPLINAATAATGD-QIEPTIQKVYDWLRDNDAIAPLVYVPSIWAHSKRVQGFTSPVTEYDMPYENIVLAE |
| 4DCX Chain:A ((30-497)) | ------------------------------------------------------------QSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLD-TFARFSQNPAYHTQLSQPIETVMLALNTAKA-PTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDAL--SKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQI---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -199245 for 3697 contacts (-53.9/contact) +
2D Compatibility (PS) -49815 + (NN) -29048 + (LL) 5044
1D Compatibility (HY) -28400 + (ID) 6700
Total energy: -308164.0 ( -83.36 by residue)
QMean score : 0.433
|
|
|