Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRYRPFGSTGVAVSALTL---RLADNPRLRANDWRALVFTALENGVNSF---QIDGDAPELLKGAGEAFAS--VERHLLFLTWRLRGDAKQLGP-----------HTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQK-GRALRGLGVASRGDIDPGLLANDL------VTAVSSPYNLSSGWAERHRIRQA-SQNNFAVIGEDFWPQALREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
| 1OG6 Chain:A ((1-297)) | LVQRITIAPQGPEFSRFVMGYWRLMD-WNMSARQLVSFIEEHLDLGVTTVDHADIYGGY-QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLIN-LATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKV-RHFGVSN---FTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMA--WSCLGGGRLFND-----DYFQPLRDELAVVA-----EELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMT-----RQQWFRIRKAALGYDV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93358 for 2144 contacts (-43.5/contact) +
2D Compatibility (PS) -28743 + (NN) -9646 + (LL) 116
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -142681.0 ( -66.55 by residue)
QMean score : 0.393
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