Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKG--EYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPP---TLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTV--KGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK----- |
| 1DT9 Chain:A ((5-422)) | PSAADRNVEIWKIKKLIKSLEAARGNG------------TSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLK----LYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDG------SGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFI-SGDKVNVAGLVLAGSADFKTELS-----QSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSN------------VKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGA----VEILIVYENLDIMRYVLILYLTPEQEKDKSHFTESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17167 for 2650 contacts (-6.5/contact) +
2D Compatibility (PS) -39626 + (NN) -15413 + (LL) 4580
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -78426.0 ( -29.59 by residue)
QMean score : 0.187
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