Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIV-YGNSDVLKEKMQEVLQKPSEGEDLSRQVAENPTSVHKLAGRNLCG-LKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEAR-RYGQESEQRA |
| 1VR8 Chain:A ((5-141)) | KIHHHHHH------PPEAYSLDTAIFVLETRDYRLSDVKEIDSYGDVEMKGKVAVFETEYGPVFLYVYKGEEAKKIWKKLNGRVSIRSVLDLPNMGKFSTVSNGKKIVAWWRKNWLFIVEGKNGVEEFVKHVYRVYEEMKQ-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 28007 for 949 contacts (29.5/contact) +
2D Compatibility (PS) -12954 + (NN) 8173 + (LL) 1284
1D Compatibility (HY) -1600 + (ID) 950
Total energy: 21960.0 ( 23.14 by residue)
QMean score : 0.090
|
|
|