Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHLIPAEQLPPLKEEE----VIEKIENDACIQKSLEKIRALSKLIYNNPEILEQDISHINANPKMGRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS
2XVC Chain:A ((4-59))
---HHHHHMITERELLDYIVNNGGFLDIEHFSKVYGV--EKQEVVKLLEALKNKGLIAVES----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18691 for 292 contacts (-64.0/contact) +
2D Compatibility (PS) -5675 + (NN) -1119 + (LL) 6428
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -21657.0 ( -74.17 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2XVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XVC-query.scw
PDB file :
Tito_Scwrl_2XVC.pdb
: