Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PYLKEKSSATVYFQTVKHNN-------I-RDLVRRCITRTSQVLV-I-LMDVFTDVEIFCDILEAANKRGV-FV-CVLLDQGGVKLFQEMCDKVQISDSHLKN-ISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFVLSGSYSFTWLCGHVHRNILSKFTGQAVELFDEEFRHLYASSKPVMGLKSP
1EDU Chain:A ((1-149))
NIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLND-----HGKNWRHVYKAMTLMEYLIKTGSERVSQQCKE----------NMYAVQTLKDFQYVDRDGKDQGVNVREK--AKQLVALLRD-----------------------EDRLREERAHALKTKEKLAQTATA
General information:
TITO was launched using:
RESULT:
Template:
1EDU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63453 for 889 contacts (-71.4/contact) +
2D Compatibility (PS) -14669 + (NN) -7863 + (LL) 3184
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -84851.0 ( -95.45 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_1EDU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EDU-query.scw
PDB file :
Tito_Scwrl_1EDU.pdb
: