Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNAMPFLPDPGEPSPLKVVIAGAGYVGTCLAVTLAGRGA--EVVAVDSDPGTVADLRAGRCRLPEPGLAGAVRDLAATGRLTASTSY-DPVGAADVVIVTVGTPTD-----AGHEMVTDQLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLESGGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGC-----GPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSMVNLLLPGVGVGGSCLTKDPWMAWRDGRDRGVPLRTVETARAVNDDMPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAALRDSGFRVRIFDPLADPAEIVARFGTAP-----------AASLDEAVSGAGCLAFLAGHRQFHELDFGALAERVDEPCLVFDGRMHLPPARIRELHRFGFAYRGIGR---- |
| 2O3J Chain:A ((3-471)) | --------DQVFGKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARG-RNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREA----QKLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDTRIGS--KFLQASVGFGGSCFQKDVLSLVYLCESLN-LPQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREI---GFRTFAIGTSPDQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261680 for 3743 contacts (-69.9/contact) +
2D Compatibility (PS) -47784 + (NN) -22096 + (LL) 1216
1D Compatibility (HY) -16800 + (ID) 5350
Total energy: -352494.0 ( -94.17 by residue)
QMean score : 0.489
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