Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | GFDPEKAQCCLVENGQILTHGSGGK--GYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHR-TTSDMWLYRAYSGNLYHNGEQTLTLS-SFTQGDFITCVLDMEA-----RTISFGKNGEEPKLAF-E-DVDAAELYPCVM-FYSSNPGEKVKICDMQMR |
| 2YYO Chain:A ((6-165)) | -----SGFKHILVDGDTLSYHGNSGEVGCYVASRPLTKDSNYFEVSIVDSGVRGT-IAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSPD--GLFPAVGMH---SLGEEVRLHLNAEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48054 for 1134 contacts (-42.4/contact) +
2D Compatibility (PS) -15261 + (NN) -3772 + (LL) 0
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -67987.0 ( -59.95 by residue)
QMean score : 0.299
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