Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GHMGSPVSYYFSYADGGTSHTEYPDDSSAGSFILDITSYKKTGNSTKALSWNASGDSWIHVNGSSVSYDENPAKERRTGLVTLKQDESGKTLSLKIVQPGKTSID----
2I6V Chain:A ((219-305))
QEIFQYVRLSQVKRD----------DKVLGYRVSPGKD-----PVLFESIGLQDGDMAVALNGLDL-------TDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF
General information:
TITO was launched using:
RESULT:
Template:
2I6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2801 for 519 contacts (-5.4/contact) +
2D Compatibility (PS) -9318 + (NN) -5067 + (LL) -128
1D Compatibility (HY) 800 + (ID) 550
Total energy: -17064.0 ( -32.88 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_2I6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I6V-query.scw
PDB file :
Tito_Scwrl_2I6V.pdb
: