Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDTEKPADTPSEEEDFGDPRTYDPDFKGPVA--NRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPTDSQG---HFCGQKGTPNENKTILFYFNLLRCTSPSVLLNLQCPTTQ------ICVSKC-----PEKFLTYVEMQ--------------LLYTKDKSYWEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSKPFLQRCFPDFSTKNGTLTI-GSKMMFQDGNGGTRSVVELGIAANGINKLLDAK---------------------------------------------------SLGLKVFEDYARTWY--------WILIGLTIAMVLSWIFLILLRFIAGCLFWVFMIGVIGIIGYGIWHCYQQYTNLQERP--SSVLTIYDIGIQTNISMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGYVPSTLVYPALTFILLSICICYWVVTA---VFLATSGVPVYKVIAPGGHCIHENQTCDPEI----FNTTEIAKACPGALCNFAFYGGKSLYH--------------QYIPTFHV-YNLFVFLWLINFVIA----LGQCALAGAFATYYWAMKKP--------------DDIPRYPLFTAFGRAIRYHTGSL----AFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSKFLQC---CLRCC----FWCLENAIKFLNRNA---------YIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLFLG--------KLLVAGSIG-----------VLAFLFFTQRLPVIA-----QGPASLNYYWVPLLTVIFGSYLIAHG--------FFSVYAMCVETIFICFLEDLERNDGSTARPYFVTPNLHGILIKKQLVPQKQKE |
| 4WZ9 Chain:A ((40-926)) | -----QAVDERYRLPTTSIPIHYDLHLRTEIHRNERTFTGTVGIQLQVVQATDKLVMHNRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTDTTFEHITFTSPTILQPGTYLLEVAFQGRLATNDDGFYVSSYVADNGERRYLATTQFESTSARMAFPCYDEPGLKATFTVSITHSLSYKAISNMPQKTTTDI--ETDMRTTFFEKTPAMSTYLLAFVVSDFQLRLSGAQRVYVRPNAFNEA-TFALEAGVKILKVLDDHLGIPYDTYMPKLDQIAIPDFAAGAMENWGLVTYREQALLFNPAVSTYRGKTNVATTIAHEYAHQWFGNLVSPEWWEYIWLNEGFATLYEFYALDMAYPGQEYWELFNQQV------IQYAMGQDGQASTRPMNWNAATPGEISALFD-RVAYDKSGSVLNMMRHVLGDDNWKAGLKAYLTDRALQGAVDEQLYAGLQSAIEGKGVLP--NGVTVAQIMRTWTNEAGYPVLNVRRSYDTGDVIISQERFYNDRKVPNTNIWMIPYNYVHQAKADFNEFDDFQWLATKAARIETTVPANEWIVFNKQQVGYYRVNYDEHNWELITNALHENWASIHRLNRAQLIDDAYWLARSGRLDLRVALRFMTYLRNEREYAPWTAANVALTYFNNRLRGTAEYHNFLIFVDALIEDIYSLLTIDAVSPDDTLLHKYLVQTISTWACSMGYTDCLMKTAALLKAEASGTGPAVHPDIASVTYCYGMRSALESEFQYLYRKMMNSKNLAERTMLIDSLGCSNNKEFLKAFLTTALGSINYRADERRRVVQAIYSGGRTGVDALIEFLMDPALVNEFVSTLSTSTLNSALSAIASRTNNVEEMNKLNALITALGSRVNSQTAANLRTTAQANLDWVNGFEGLMLSNFLAEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -527530 for 5077 contacts (-103.9/contact) +
2D Compatibility (PS) -72524 + (NN) -12504 + (LL) 1612
1D Compatibility (HY) -13600 + (ID) 5650
Total energy: -630196.0 ( -124.13 by residue)
QMean score : 0.102
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