Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFG---MLASGAFTALFGLGYFYNIHS-FGFYVVTQVINGLVQTTG----WPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVD---HLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSP-SGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ |
| 2CFQ Chain:A ((39-392)) | ----------------------------------------------------------------------------------------HISK----SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIF-----GPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS--RRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVL-LFFAKTDAPSSATVAN-AV------------------------GA-N-H------------S--------------AFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGS-SFA-T-SALEVVILKTLHMFEVPFLLVGCFKYI-TSQF-EVRFSATIYLVCF-----CFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211776 for 2597 contacts (-81.5/contact) +
2D Compatibility (PS) -33647 + (NN) 7227 + (LL) 9652
1D Compatibility (HY) -14000 + (ID) 2200
Total energy: -244744.0 ( -94.24 by residue)
QMean score : 0.131
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