Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFY-KGTGP-ALMAYVAENSVLFM---CYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAK--SHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY |
| 1MMF Chain:A ((250-365)) | ------------------------------------------------------YASRGLKMRYTSGTGSEALMGYSESKSMLYLESRCI-----FITKGAG------VQGLQNGAVSCIGMTGAVPSGIRAVLAENLIASMLDLEVASANDQTFSHSDIRRTAR-----------------TLMQMLPGTDFIFSGYSAVPNYDNMFAGSNFDAEDFDDYNILQRDLMVDGGLRPVTEAETIAIRQKAARAIQAVFRELGLPPIADEEVEAATYAHGSNEMPPRNVVEDLSAVEEMMKRNITGLDIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28075 for 806 contacts (-34.8/contact) +
2D Compatibility (PS) -11022 + (NN) -492 + (LL) 3792
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -44497.0 ( -55.21 by residue)
QMean score : 0.085
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