Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPALAVGLVFAGCCSNVIFLELLARKHPGCGNIVTFAQFLFIAVEGFLFEADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTF-MSAKQVTSQSSLSENDGFQAFVWWLL-GIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASD-IYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFILTTECASLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFVFIGTLMYTEVWNNLGTTKSEPQKDSKKN |
4RS7 Chain:A ((1-87)) | -------------------------------------------------------------------------------------------------------------------------------ADLESLYRAMPSIKKLVDEGKLTEKDAEKVYEIWRNMEAIYKQASLLWYNTVDLLLKRI--GLSEKEREEIFY--------------EMVRPYFRLFSREEVF-------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13574 for 406 contacts (-33.4/contact) +
2D Compatibility (PS) -8128 + (NN) 1932 + (LL) 22016
1D Compatibility (HY) 1200 + (ID) 200
Total energy: 3246.0 ( 8.00 by residue)
QMean score : 0.016
|
|
|