Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKWYQSSK |
| 4XDK Chain:A ((178-261)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGG------REWYKPL-----VWFWILVGLAYFAAVLSMIGDWLRVLS------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22250 for 424 contacts (-52.5/contact) +
2D Compatibility (PS) -7012 + (NN) 4064 + (LL) 21468
1D Compatibility (HY) -9600 + (ID) 1000
Total energy: -14330.0 ( -33.80 by residue)
QMean score : 0.002
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