Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIR-ELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTM--SCSEGFKNLFYRTYM-LFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFL-TSFLGIWLFSYCMEDIHMAFIGIF---TTMTGMAMTAFA--STTLMMFL-ARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGV-TAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR |
| 1PW4 Chain:A ((63-431)) | ----------------------------------------------------------------------GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMG--WPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND----------TAKQIFMQY-VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315450 for 2728 contacts (-115.6/contact) +
2D Compatibility (PS) -33407 + (NN) 5560 + (LL) 7168
1D Compatibility (HY) -12400 + (ID) 2200
Total energy: -350729.0 ( -128.57 by residue)
QMean score : 0.171
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