Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTELVHRGSVY---DAREFSVHFVCGGLAACMATLTVHPVDVLRTRFAAQGEP----KVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR |
| 1OKC Chain:A ((2-293)) | ---------DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQIS-AEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-----KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG-----ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76180 for 2125 contacts (-35.8/contact) +
2D Compatibility (PS) -29102 + (NN) -3505 + (LL) 1352
1D Compatibility (HY) -14800 + (ID) 3150
Total energy: -125385.0 ( -59.00 by residue)
QMean score : 0.154
|
|
|