Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSM-YLSATG--HYNPFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSA---PFEDIYFGLWGFNSSLACIAMGGMF---MALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL |
| 4HC1 Chain:H ((11-194)) | -------------------------------------------------------------------------------------------------------------------------------------------------LVKPSQSLSLTCSVTGYSITSGY-YWNW-IRQFPGNKLEWMGYISYDGSNNYNPSLKNRVSITRDTSKNHFFLKLSSVTTEDTATYYCARASDSD----GFAYWGQ--------------GTLVTVSAAKTTAPSVYPLAPVCGGTTGSSVTLGCL-VKGYFPEPVTLTWNSGSLSSGVHTFPAILQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRVP---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123051 for 1112 contacts (-110.7/contact) +
2D Compatibility (PS) -18785 + (NN) 2099 + (LL) 13724
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -135963.0 ( -122.27 by residue)
QMean score : -0.089
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