Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFKAFDTFKEKILKPGKEGVKNAVGDSLGILQRKIDGTTEEEDNIELNEEGRPVQTSRPSPPLCDCHCCGLPKRYIIAIMSGLGFCISFGIRCNLGVAIVEMVNNSTVYVDGKPEIQTAQFNWDPETVGLIHGSFFWGYIMTQIPGGFISNKFAANRVFGAAIFLTSTLNMFIPSAARVHYGCVMCVRILQGLVEGVTYPACHGMWSKWAPPLERSRLATTSFCGSYAGAVVAMPLAGVLVQYIGWSSVFYIYGMFGIIWYMFWLLQAYECPAAHPTISNEEKTYIETSIGEGANVVSLSKFSTPWKRFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFAISKVGLLSAVPHMVMTIVVPIGGQLADYLRSRQILTTTAVRKIMNCGGFGMEATLLLVVGFSHTK-GVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTRHKTREEWQNVFLIAALVHYSGVIFYGVFASGEKQEWADPENLSEEKCGIIDQDELAEEIELNHESFASPKKKMSYGATSQNCEVQ-KKEWKGQRGATLDEEELTSYQNEERNFSTIS- |
| 1WCD Chain:J ((11-431)) | -----IVPFIRSLLMPTTG--PASIPDD--TLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFP-----------------GSIVG----------------------------------AHYTLQGN------GNYKFDQMLLTAQN--LPASYNYCRLVSRSLTVRSST---LPGGVYALNGTINAVTFQGSLSE-LTDVSYNGLMSATANINDKIGNVLVG-----EGVTVLSLPTSYDLGYVRLGDP---------------IPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRT------------------------SVHGLVLGATIYLIGFDGTTVITRAVAANNGLT-------TGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHG-----GNYPGALRPVTLVAYERVATG----------SVVTVAGVSNFELIPN----------------------PELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWP-----------TREYTDFREYFMEVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208443 for 3493 contacts (-59.7/contact) +
2D Compatibility (PS) -43964 + (NN) -4512 + (LL) 11448
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -256621.0 ( -73.47 by residue)
QMean score : 0.189
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