Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSLCVLFTLASVVSGHVAHPSLGRGDGFPFLWDNAASTLDQLNGTDTTIILNGFNYLDRLSMFKTVLEGTRKYFDSFAPNNTANIYWGFTIYLNWILATGRSADPTGHTTCGLAHGDPMCLAEESWWNCIKYNPAAIAFFAAKKAGIFGDVTKTIVLAKPKEANSPYCSSEEECQAAYPDVMATYLDYFEYLMSLEKTGESIDMDKAQQLLWKAHVTSMENSIAVCKPRLKNYNIIERQLDRDYLISLLYFAATNFPTNFIESIKFVADMPHRQLRFGDIAPFIPDMDMKKNNLLVVLHGFYTVHSLSGGSSLTHWRNLMESPVSREMARDMVNLILAGTPVEVQVELAKLGIPTPVDYKDDDK |
| 2YL9 Chain:A ((60-108)) | --------------------HLLLGN-DGLRFLLD------------DMTITANGKTYASD-DVKKAIIEGTKAYYDD--PNGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8003 for 256 contacts (-31.3/contact) +
2D Compatibility (PS) -5580 + (NN) -6192 + (LL) 21956
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -1819.0 ( -7.11 by residue)
QMean score : 0.031
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