Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
1QCE Chain:A ((2-122))
----------------------------QSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVP----WPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLN
General information:
TITO was launched using:
RESULT:
Template:
1QCE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10352 for 616 contacts (16.8/contact) +
2D Compatibility (PS) -13283 + (NN) -6152 + (LL) 1940
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -17293.0 ( -28.07 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_1QCE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QCE-query.scw
PDB file :
Tito_Scwrl_1QCE.pdb
: