Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
| 3QKY Chain:A ((30-280)) | RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK---------------EYLLAASEYERFIQIY--QIDPRVPQAEYERAMCYYKLSPPYELDQ------TDTRKAIEAFQLFIDRYPNH---------ELVDDATQKIRELRAKLARKQYEAARLYERREL---YEAAAVTYEAVFDAYPDTPW--ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDS---PLLRTAEELYTRARQRLTELE----GDASLAQGQRQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6692 for 1977 contacts (3.4/contact) +
2D Compatibility (PS) -25668 + (NN) 2051 + (LL) 2064
1D Compatibility (HY) 7200 + (ID) 1050
Total energy: -8711.0 ( -4.41 by residue)
QMean score : 0.046
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