Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTTSTRQGSRVVGF-MDFIIALGW--QIIPSNIRYIYILNCSQFMPTSDVT----TIYFQADSGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ--
2LVL Chain:A ((1-128))
GSTMHFTDDNENDTSETMESLIDKGKLDQVVYDDQLYHLKEKVDEDKKGKVIGAIGQTFFVDGDGKRWSEEELKEPYISNNPDEIREKKPLRYGKVYSTNEDSDA---KDEIIVEFNREYYRAVLIKNEKE
General information:
TITO was launched using:
RESULT:
Template:
2LVL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32657 for 682 contacts (-47.9/contact) +
2D Compatibility (PS) -12533 + (NN) -3129 + (LL) 256
1D Compatibility (HY) 800 + (ID) 800
Total energy: -48063.0 ( -70.47 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_2LVL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVL-query.scw
PDB file :
Tito_Scwrl_2LVL.pdb
: