Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKL--NEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR |
3O3V Chain:A ((194-255)) | ----------------------------------------------------------------------------------------------------------------------------------LGAVIENVTGKTFTEVIAERLTQPLGMSATVAVKGDEIIVNKASGYKLGFGKPVLFHAPLAR-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3096 for 280 contacts (-11.1/contact) +
2D Compatibility (PS) -5926 + (NN) 1336 + (LL) 13340
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 2054.0 ( 7.34 by residue)
QMean score : 0.048
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