Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG |
2RNN Chain:A ((-3-111)) | ---MINLEDYWEDETPGPDREP---TNELRNEVEETITLMELLKVSELKDICRSVSFPVSG--------------RKAVLQDLIRNFLQNALVVGKSDPYRVQAVKFLIERIRKNE---------PLPVYKDLWNALRKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9665 for 675 contacts (14.3/contact) +
2D Compatibility (PS) -11759 + (NN) -3550 + (LL) 1668
1D Compatibility (HY) 1200 + (ID) 250
Total energy: -3026.0 ( -4.48 by residue)
QMean score : 0.056
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