Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTL---RLADNPRLRANDWRALVFTALENGVNSF------------QIDGDAPELLKGAGEAFASVERHLLFLTWRLRGDAKQLGP-----------HTLDALKRSAFEGLSLDYLDLLLINDPQSASLP-----------------MAFESGLQDLQK-GRALRGLGVASRGDIDPGLLANDLVTAVSSP--------YNLSSGWAERHRIRQASQNNFAVIG---------EDFWPQALREVADKAPPKPSFWQRRTDP-LADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
| 1LQA Chain:A ((1-346)) | MQYHRIPHSSLEVSTLGLGTMTFGE--QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREK--LIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR-LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKI-RYIGV-SNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELS-----EDVLAEIEAVHQVYTYPAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69051 for 2125 contacts (-32.5/contact) +
2D Compatibility (PS) -30166 + (NN) -12496 + (LL) 420
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -121843.0 ( -57.34 by residue)
QMean score : 0.401
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