Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQ-KLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAI-LSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLND---KAVATSQLQKKLGQLLYLTNLEK-- |
1DIK Chain:? ((510-874)) | ---------IETQEASVSGSFERIMVWADKFRTLKVRTN--ADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDS-----------VEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHE----FVPHTEEEQAELAKN------MGLTLAEVKAKVDELHEFNPMMGHRGCRLAVT--YPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIP------LVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQT---------------GVGQLVEMAVKKGRQTRP------GLKCGICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNNK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1545 for 3103 contacts (0.5/contact) +
2D Compatibility (PS) -38448 + (NN) -14300 + (LL) 4364
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -56539.0 ( -18.22 by residue)
QMean score : 0.234
|
|
|