Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------MFFSKDEKNPIK-----RALQGELLQNEPFIQLCTKIENYLMDTE--AVNEQLIELNEQLTMRLKEKGLKPGEKGATKQLRTLIQE-ILTEAGFREGMLQTIGNKPLKKEDFMFL---VSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLE------------NIPTSEICDRIYKKLGHQDSSNPNYPFTCW--DVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLRE------------VIKNRTEKGKTEENKGKLQKKLENPPEHY-----------------EKHEEIENILMPKPK------- |
2WAA Chain:A ((7-341)) | MSSTHTIAASDPHIQVMGRTHINDDASLTFGYPGVSLSTIVAGSRLTAEMQSSNGNSWIDVIIDNHPPTSIKLDAQQQTVELFHFPNSGEHRVEIIHRSENWHGQVTLKQLTLTGTQFLPAPVLPQRKILVLGDSVTCGEAIDRVAGEDKNTRWWNARESYGMLTAKALDAQVQLVCWGGRGLIRSWNGKTDDANLPDFYQFTLGDTGQAPQWDHHRYQPDLIISAIGTNDFSPGIPDRATYINTYTRFVRTLLDNHPQATIVLTEGAILNGDKKAALVSYIGETRQQLHSNRVFYASSSHHPGDNSDAHPTKDQHAAMARELTPQLRQIMDWLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16362 for 1827 contacts (9.0/contact) +
2D Compatibility (PS) -26136 + (NN) 8811 + (LL) 0
1D Compatibility (HY) 400 + (ID) 1700
Total energy: -2263.0 ( -1.24 by residue)
QMean score : 0.071
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