Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNY-D-SANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQYGLVTGDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIG----MVASETENIIYLVSTDGAIYKYILGDSDSLKAPFIAAESGVSITAP---LQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
| 3HXJ Chain:A ((12-322)) | ----------------------------------------KWEFLIGNSID--------SSPILAKNGTIYLGSSNKNLYAINTDGSVKWFFK----------------SGEIIECRPSIGKDGTIYFGSDKVYAINPDGTEKWRFDTSDFTIFEDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSN-------------DNYLYAINPDGTEKWRFKTNDAIT---------------------------------------------SAASIGKDGT--------IYFGSDKVYAINP--DGTEKWNFY--------------AGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENG-----TIYFGTRNGKFYALFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23992 for 2334 contacts (-10.3/contact) +
2D Compatibility (PS) -32836 + (NN) -17352 + (LL) 10332
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -72548.0 ( -31.08 by residue)
QMean score : 0.213
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