Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAMHFIFSDTAVLLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDGDSAGSDSFPVGRTHHRWYLCHFGQSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYLAYPLLSTA |
1FLR Chain:L ((3-48)) | -------------------------------------------------VMTQTPLSLPVSLGDQ--ASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3332 for 155 contacts (21.5/contact) +
2D Compatibility (PS) -4631 + (NN) 139 + (LL) 5180
1D Compatibility (HY) -800 + (ID) 850
Total energy: 2370.0 ( 15.29 by residue)
QMean score : 0.114
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