Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNRAPLKRSRILHMALTGASDPSAEAEANG---------EKPFLLRALQIALVV-SLYWVTSISMVFLNKYLL----DSPSLRLDTPIFVTFYQCLVTTLL-----CKGLSALAACCPGA-----------VDFPSLRLDLRVARSVLP-LSVVFIGMITFNN-------LCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTC---GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTT----KVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGS------SAYTWVRGWEMKKTPEEPSPKDSEKSAMGV---- |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSG---------------------------PQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260933 for 2291 contacts (-113.9/contact) +
2D Compatibility (PS) -34782 + (NN) -11240 + (LL) 1424
1D Compatibility (HY) -13200 + (ID) 3000
Total energy: -321731.0 ( -140.43 by residue)
QMean score : 0.250
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