Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEPLLGAEGPDYDTFPEKPPPSPGDRARVGTLQNKRVFLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAH----GLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGL-----LLPWRWLAVAGEAPVLIMILL-LSFMPNSPRFLLSRGRDEEALRALAWLRGTDVDVHWEFEQIQDNVRRQSSRVSWA-EARAPHVCRPITVALLMRLLQQLTGITPILVYLQSIFDST-AVL-LPPKDDAAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANL-TLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAV-GWGPITWLLMSEVLPLRARGVASGLCVLASWLTAF-VLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQIESFFRTGRRSFLR |
| 1PW4 Chain:A ((27-449)) | -------------------------------------RWQIFLGIFFGYAAYYLVRKNFALAMPYLV-----EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND-------------------------TAKQIFMQYVLPNKLLW-----YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP-A----------------------------GNPTVDMICMIV--IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347402 for 3333 contacts (-104.2/contact) +
2D Compatibility (PS) -39276 + (NN) 1852 + (LL) 4484
1D Compatibility (HY) -13600 + (ID) 2300
Total energy: -396242.0 ( -118.88 by residue)
QMean score : 0.234
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