Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGGWGWVVAAAAFAINGLSYGLLRSLGLAFPDLAEHFDRSAQDTAWISALALAVQQAASPVGSALSTRWGARPVVMVGGVLASLGFVFSAFAS----DLLHLYLGLGLLAGFGWALVFAPALGTLSRYFS-RRRVLAVGLALTGNGASSLLLAPALQLLLD-TFGWRGALLLLGAITLHLTPCGALLLPLVLPGDP-----PAPP-RSPLAA-----LGLSLFTRRAFSIFALGTALVGGGYFVPYVHLAPHALD-RGLGGYGAALVVAVAAMGDAGARLVCGWLADQGWVPLPRLLAV-FGALTGLGLWVVGLVPVVGGEESWGGPLLAAAVAYGLSAGSYAPLVFGVLPGLVGVGGVVQATGLVMMLMSLGG-LLGPPLSGFLRDETGDFTASFLLSGSLILSGSFIYIGLPRALPSCGPASPPATPPPETGELLPAPQAVLLSPGGPGSTLDTTC |
| 1PW4 Chain:A ((22-430)) | --------------------------------TYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL-LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP---AGNPTV--DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -317538 for 3247 contacts (-97.8/contact) +
2D Compatibility (PS) -38581 + (NN) -12713 + (LL) 1420
1D Compatibility (HY) -16000 + (ID) 2600
Total energy: -386012.0 ( -118.88 by residue)
QMean score : 0.243
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