Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVLHFCNFTTIAQNVIMNITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAKSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFISETLGWPFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIISSLKQQVGSSKQPLPIKAMLRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPFIVAWVIGMVGGYLADFLLTKKFRLITVRKIATILGSLPSSALIVSLPYL---NSGYIT--ATALLTLSCGLSTLCQSGIYINVLDIAPR-YSSFLMGASRGFSSIAPVIVPTVSGFLLSQDPEFGWRNVFFLLFAVNLLGLLFYLIFGEADVQEWAKERKLTRL |
3O7Q Chain:A ((40-177)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VANNLNDILLPQFQ-QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIIT---------GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL---ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3O7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98089 for 872 contacts (-112.5/contact) +
2D Compatibility (PS) -12546 + (NN) 6453 + (LL) 16576
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -91656.0 ( -105.11 by residue)
QMean score : -0.065
|
|
|