Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEARVLRAAGGFGRARRLLASASWVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPALRALRGPALLDAAIPRLGPTRAPAEALGVLSPSYLAPLTRAPRPSSWASCSGAAAGPTWNLVCGDGWKVPLEQVSHLLGWLLGCVILGAGCDRFGRR-AVFVASLV--LTTGLGASEALAASFPTLLVLRLLHG--GTLAGALLALYLARLELCDPPHRLAFSMGAGLFSVVGTLLLP--GLAALVQD---WRLLQG---LGALMSGLLLLFWGFPALFPESPCWLLAT-GQVARARKILWRFAEASGVGPGDSSLEENSLATATE--LTMLSA-RSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAP-QVPTFYLPYFLEAG---LEAAALVFLLLTADCCGRRPVLLLGTM-VTGLASLLLLAGA--QYLPGWTVL-FLSVLGLLASRAVSA-------LSSLFAAEVFPTVIRGAGLGLVLGAGFLGQAAGPLDTLHGRQGFFLQQVVFASLAVLALLCVLL-LPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH |
| 4PYP Chain:A ((74-455)) | -----------------------------------------------------------------------------------------------------------------------------------------VGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVG--EVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFC------PESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPA--YRQPILI---------AVVLQLSQQL-SGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVF----IIFTVLLVLFFIFTYFKVPET------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240646 for 2629 contacts (-91.5/contact) +
2D Compatibility (PS) -35673 + (NN) -19720 + (LL) 11272
1D Compatibility (HY) -34000 + (ID) 4950
Total energy: -323717.0 ( -123.13 by residue)
QMean score : 0.231
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