Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPV-----ELALTSILTLL----------ALGSIAIFLEDAV----------------------------YLYKNTLCPIKRRTLLWKSSAPTVV-SVLCCFGLWI----PRSLVLVEMTITSFYAVCFY-------------LLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKKLQLLM--LGPF-QYAFLK-ITLTLVGLFLVPDGIYDPADI----SEGSTALWINTFLGV---------STLLALWTL-GIISRQARLHLGEQNMGAKFALFQVLLILTALQPSI-FSVLANGGQI-ACS-PPYSSKTRSQVMN-CHLLI---------LETFLMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA----------- |
| 4OWT Chain:A ((1-466)) | GGRLLLSTSLDAKDELEERLERCMSIVTSMTAGVSEREANDALNAYVCKGLPQHEEICLGLFTLILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVLKSSILIAMAVYTYLRLIVDHHGTAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSPQ-----FTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASN--AKLALFYDWLFFSPDKDSIMN--IEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHL-APLFDNPKLDKELRAMLREKFPEFCS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91071 for 2000 contacts (-45.5/contact) +
2D Compatibility (PS) -32531 + (NN) -1750 + (LL) 112
1D Compatibility (HY) 12800 + (ID) 1050
Total energy: -113490.0 ( -56.75 by residue)
QMean score : -0.023
|
|
|