Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDLITEPFLPKLLTKVKGS
3RKO Chain:J ((129-158))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVL----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8198 for 123 contacts (-66.7/contact) +
2D Compatibility (PS) -2983 + (NN) -165 + (LL) 25500
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 11354.0 ( 92.31 by residue)
QMean score : -0.232

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: