Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGA-RKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAALFDKIGPGVFITHSQGGPVGWNTLLKTRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 1VE6 Chain:A ((8-581)) | EFSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFIDGERVEAPQGNHGRVVLWRGKLVTSHTSLSTPPRIVSL--------PSGEPLLEGGLPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAED----SDSWDTFAASLAAAGFHVVMPNY--RGSTGYGEEWRLKII--------GDPCGGELEDVSAAARWARESGLASELYIMGY------SYGGYMTLCALTMKPGLFKAGVAG--ASVVDWEEMYELSD-----------------AAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQN----DSR-------TPLKPLLRLMGELLARGKTFEAHIIP-----DAGHAINTMEDAVKILLPAVFFLATQRER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104807 for 2389 contacts (-43.9/contact) +
2D Compatibility (PS) -30341 + (NN) -13484 + (LL) 4040
1D Compatibility (HY) 2800 + (ID) 2000
Total energy: -143792.0 ( -60.19 by residue)
QMean score : 0.256
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