Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMEKKWPFVFNGIVIFCLILLILGMRWQAKKEESEVLNVTESLQKESEITSFSEEEEAVLYMLSALKKNDLDMALRGCAIDETALQINFVKTAEELPGMQLIDLPAPTSDYSYYFPLTSAEMTKAYIEQFEELSTEIPEIETLEVLEIAEKKEKERE-----------------------EQLAECL--AAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLLYETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAMPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLSKEESRKTSEQSVLKAEKNER |
| 1NNE Chain:A ((446-555)) | ----------------------------------------------------------------------------------------------------------------FGYYL-----EVTRPYYERVPKEYRPVQTLKDRQRYTLPEMKEKEREVYRLEALIRRREEEVFLEVRERAKRQAEALREAARILAELDVYAALAEVAVRYGYVRPRFGDRLQIRA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4323 for 372 contacts (-11.6/contact) +
2D Compatibility (PS) -9291 + (NN) -2710 + (LL) 25908
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: 1534.0 ( 4.12 by residue)
QMean score : 0.025
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