Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------MMKLHLKYLWIVLVACTLTACMNGGGDLAGKWQLRQYQYAD-GTSEKVDSVFYNFQKGSFSAICLLKDGGLTTFFGN-YSLKGAEISIILLPESVNDKNYDTYFGWPEG----------KCTFKVE-DLSYSSLRLEYEGTKSIFRKF--
1HTW Chain:A ((1-158))
MESLTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLN---------GDLGAGKTTLTRGMLQGIGHQGNVKSP-------TYTLVEEYNIAGKMIYHFDLYRLADPEELEFMGIRDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQTNLGKNIISAFSN
General information:
TITO was launched using:
RESULT:
Template:
1HTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46069 for 786 contacts (-58.6/contact) +
2D Compatibility (PS) -13127 + (NN) -4783 + (LL) 780
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -68749.0 ( -87.47 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_1HTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTW-query.scw
PDB file :
Tito_Scwrl_1HTW.pdb
: